Senior Data Scientist - Medical Imaging

Formation Bio

Boston, MA · New York, NY · Research Triangle, NC · San Francisco Bay Area, CAFull-time$177,500–$232,000Posted Oct 21, 2026

About the role

About Formation Bio

Formation Bio is a tech and AI driven pharma company differentiated by radically more efficient drug development.

Advancements in AI and drug discovery are creating more candidate drugs than the industry can progress because of the high cost and time of clinical trials. Recognizing that this development bottleneck may ultimately limit the number of new medicines that can reach patients, Formation Bio, founded in 2016 as TrialSpark Inc., has built technology platforms, processes, and capabilities to accelerate all aspects of drug development and clinical trials. Formation Bio partners, acquires, or in-licenses drugs from pharma companies, research organizations, and biotechs to develop programs past clinical proof of concept and beyond, ultimately helping to bring new medicines to patients. The company is backed by investors across pharma and tech, including a16z, Sequoia, Sanofi, Thrive Capital, John Doerr, Spark Capital, SV Angel Growth, and others.

You can read more at the following links:

Our Vision for AI in Pharma

Our Current Drug Portfolio

Our Technology & Platform

At Formation Bio, our values are the driving force behind our mission to revolutionize the pharma industry. Every team and individual at the company shares these same values, and every team and individual plays a key part in our mission to bring new treatments to patients faster and more efficiently.

About the Position

As a Senior Data Scientist - Medical Imaging at Formation Bio, you will lead our efforts to integrate advanced imaging analytics and AI into our drug development pipeline. In this role, you'll pioneer the application of computer vision and deep learning to medical imaging data (MRI, X-ray, CT, PET) to accelerate clinical trials and improve patient outcomes. You'll develop state-of-the-art models for automated image analysis, disease progression monitoring, and treatment response assessment. Working closely with clinical teams, radiologists, and drug development experts, you'll translate complex imaging data into actionable insights that drive key decisions across our portfolio. This position offers a unique opportunity to revolutionize how medical imaging is leveraged in pharmaceutical development while directly impacting patient care.

Responsibilities

Lead the development of advanced deep learning models for medical image analysis, focusing on MRI and X-ray modalities for clinical trial applications

Design and implement automated image processing pipelines for disease detection, segmentation, and quantification across multiple therapeutic areas

Create innovative approaches for longitudinal image analysis to track disease progression and treatment efficacy in clinical trials, incl. AI-based biomarkers and surrogate endpoints

Collaborate with clinical operations to integrate imaging AI solutions into trial protocols and workflows

Partner with regulatory teams to ensure imaging biomarkers and AI models meet FDA standards for clinical trial endpoints

Build scalable infrastructure for processing and analyzing large-scale medical imaging datasets from multi-site clinical trials

Present imaging insights and model performance to executive leadership and external partners

About You

Required Qualifications

PhD in Computer Science, Biomedical Engineering, Medical Physics, or related field with focus on medical imaging

5+ years of post-PhD industry experience developing production-grade AI models for medical imaging applications

Deep expertise in computer vision and deep learning architectures (CNNs, U-Net, Vision Transformers) for medical image analysis

Proven track record with MRI and X-ray image analysis, including hands-on experience with DICOM standards and medical imaging software

Strong programming skills in Python with expertise in PyTorch/TensorFlow and medical imaging libraries

Demonstrated ability to collaborate with radiologists and clinical teams to translate medical insights into technical solutions

Strong communication skills with proven ability to present complex imaging analytics to diverse stakeholders

Preferred Qualifications

Experience with regulatory submissions involving imaging endpoints or AI-based image analysis tools

Experience with multi-modal imaging fusion and analysis (combining MRI, CT, PET data)

Knowledge of clinical trial design and experience with imaging core lab operations

Experience with federated learning or privacy-preserving techniques for medical imaging

Understanding of radiomics and quantitative imaging biomarker development

Experience with 3D image reconstruction and volumetric analysis

Total Compensation Range: $177,500 - $232,000

Compensation Individual compensation is determined by several factors, including role scope, geographic location, and skills & experience. Your offer will reflect where you fall within the range based on these considerations. In addition to base salary, we offer equity, comprehensive benefits, and generous perks. If the posted range doesn't match your expectations, we still encourage you to apply!

Where We Hire Formation Bio is prioritizing hiring in key hubs, primarily the New York City and Boston metro areas, with a hybrid model requiring 3 days per week in office. Applicants from the Research Triangle (NC) and San Francisco Bay Area may also be considered. Please apply only if you reside in these locations or are willing to relocate.

Equal Opportunity Formation Bio is committed to building a diverse and inclusive team. We are an equal opportunity employer and welcome candidates from all backgrounds. All qualified applicants will receive consideration for employment without regard to race, color, creed, religion, national origin, ancestry, sex (including pregnancy, childbirth, breastfeeding, and related medical conditions), gender identity or expression, sexual orientation, age, disability, genetic information, marital status, military or veteran status, or any other characteristic protected by federal, state, or local law.

We've seen a rise in recruiting impersonation scams across the industry, where fake profiles pose as recruiters aiming to trick candidates into sharing personal and financial information through illegitimate interviews and job offers. All legitimate recruiting communications from Formation Bio will come from a @formation.bio email address. If you receive outreach from someone claiming to work at Formation Bio through any other domain or channel, please disregard it and do not share any personal information.

Responsibilities

  • Lead development of deep learning models for medical image analysis, especially MRI and X-ray applications in clinical trials.
  • Build automated pipelines for image detection, segmentation, and quantification.
  • Develop longitudinal imaging methods to track disease progression and treatment efficacy.
  • Integrate imaging AI into clinical trial protocols and workflows with clinical operations teams.
  • Partner with regulatory teams to align imaging biomarkers and AI models with FDA standards.
  • Build scalable systems for analyzing large medical imaging datasets from multi-site trials.
  • Present imaging insights and model performance to executives and external partners.

Qualifications

  • PhD in Computer Science, Biomedical Engineering, Medical Physics, or a related field focused on medical imaging.
  • At least 5 years of post-PhD industry experience developing production-grade medical imaging AI models.
  • Deep expertise in computer vision and deep learning architectures such as CNNs, U-Net, and Vision Transformers.
  • Hands-on experience analyzing MRI and X-ray images, DICOM standards, and medical imaging software.
  • Strong Python programming skills and expertise with PyTorch or TensorFlow and medical imaging libraries.
  • Ability to collaborate with radiologists and clinical teams and communicate complex findings to diverse stakeholders.
  • Preferred experience with regulatory submissions, multimodal imaging, clinical trials, federated learning, radiomics, imaging biomarkers, or 3D image analysis.

Benefits

  • Equity
  • Comprehensive benefits
  • Generous perks

Skills mentioned

PythonDeep LearningComputer VisionPyTorchTensorFlowMachine LearningNeural NetworksConvolutional Neural NetworksModel EvaluationData Science

About Formation Bio

Formation Bio is an AI-native pharma company differentiated by radically more efficient drug development. The company has built proprietary technology platforms to optimize critical aspects of clinical drug development, enabling more efficient trial design, faster trial completion, and higher quality trial data. Formation Bio acquires clinical-stage drugs from pharmaceutical and biotech companies with the goal to develop assets faster, unlock greater value per program and ultimately accelerate access to new treatments for patients. 2025 CNBC Disruptor 50 2025 Fierce 15 Award 2024 Endpoints 11 Award

Biotechnology Research51-200 employeesNew York, NY

H-1B sponsorship history

Historical employer filing data was found for Formation Bio. The employer record includes 5 historical certified applications. This is employer-level history, not a guarantee that this role currently offers sponsorship.